-- 5.6

 rm -rf ../5639
 rm -rf CMakeCache.txt
 cmake . -DWITH_DEBUG=OFF -DMYSQL_SERVER_SUFFIX=123456789012345678901234567890123456789012345678901234567890 -DCMAKE_INSTALL_PREFIX=/export/umesh/server/source/bugs/src_build/89438/5639
 make -j16 &&  make install


cd ../5639
rm -rf 89486
scripts/mysql_install_db --basedir=$PWD --datadir=$PWD/89486
bin/mysqld --no-defaults --basedir=$PWD --datadir=$PWD/89486 --core-file --socket=/tmp/mysql_ushastry.sock  --port=3307 --log-error=$PWD/89486/log.err 2>&1 &

[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639:
[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639: bin/mysql -uroot -S /tmp/mysql_ushastry.sock
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 1
Server version: 5.6.39123456789012345678901234567890123456789012345678901234 Source distribution

Copyright (c) 2000, 2018, Oracle and/or its affiliates. All rights reserved.

Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.

Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.

mysql> show variables like '%version%';
+-------------------------+-------------------------------------------------------------------+
| Variable_name           | Value                                                             |
+-------------------------+-------------------------------------------------------------------+
| innodb_version          | 5.6.39                                                            |
| protocol_version        | 10                                                                |
| slave_type_conversions  |                                                                   |
| version                 | 5.6.391234567890123456789012345678901234567890123456789012345678h |
| version_comment         | Source distribution                                               |
| version_compile_machine | x86_64                                                            |
| version_compile_os      | Linux                                                             |
+-------------------------+-------------------------------------------------------------------+
7 rows in set, 1 warning (0.00 sec)

mysql> \s
--------------
bin/mysql  Ver 14.14 Distrib 5.6.39, for Linux (x86_64) using  EditLine wrapper

Connection id:          1
Current database:
Current user:           root@localhost
SSL:                    Not in use
Current pager:          more
Using outfile:          ''
Using delimiter:        ;
Server version:         5.6.39123456789012345678901234567890123456789012345678901234 Source distribution
Protocol version:       10
Connection:             Localhost via UNIX socket
Server characterset:    latin1
Db     characterset:    latin1
Client characterset:    utf8
Conn.  characterset:    utf8
UNIX socket:            /tmp/mysql_ushastry.sock
Uptime:                 24 sec

Threads: 1  Questions: 6  Slow queries: 0  Opens: 67  Flush tables: 1  Open tables: 60  Queries per second avg: 0.250
--------------

mysql>

-- only issue observed is first time shutdown fails

[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639: bin/mysqladmin -uroot -S /tmp/mysql_ushastry.sock shutdown
bin/mysqladmin: connect to server at 'localhost' failed
error: 'Error in server handshake'
[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639: bin/mysqladmin -uroot -S /tmp/mysql_ushastry.sock shutdown
[1]+  Done                    bin/mysqld --no-defaults --basedir=$PWD --datadir=$PWD/89486 --core-file --socket=/tmp/mysql_ushastry.sock --port=3307 --log-error=$PWD/89486/log.err 2>&1


-- debug

 rm -rf ../5639
 rm -rf CMakeCache.txt
 cmake . -DWITH_DEBUG=ON -DMYSQL_SERVER_SUFFIX=123456789012345678901234567890123456789012345678901234567890 -DCMAKE_INSTALL_PREFIX=/export/umesh/server/source/bugs/src_build/89438/5639
 make -j16 &&  make install

cd ../5639
rm -rf 89486
scripts/mysql_install_db --basedir=$PWD --datadir=$PWD/89486
bin/mysqld --no-defaults --basedir=$PWD --datadir=$PWD/89486 --core-file --socket=/tmp/mysql_ushastry.sock  --port=3307 --log-error=$PWD/89486/log.err 2>&1 &

[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639: 2018-01-31 17:02:09 0 [Warning] TIMESTAMP with implicit DEFAULT value is deprecated. Please use --explicit_defaults_for_timestamp server option (see documentation for more details).
2018-01-31 17:02:09 0 [Note] --secure-file-priv is set to NULL. Operations related to importing and exporting data are disabled
2018-01-31 17:02:09 0 [Note] bin/mysqld (mysqld 5.6.39123456789012345678901234567890123456789012345678901234567890-debug) starting as process 11108 ...

[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639:
[umshastr@hod03]/export/umesh/server/source/bugs/src_build/89438/5639:
[1]+  Segmentation fault      (core dumped) bin/mysqld --no-defaults --basedir=$PWD --datadir=$PWD/89486 --core-file --socket=/tmp/mysql_ushastry.sock --port=3307 --log-error=$PWD/89486/log.err 2>&1




(gdb) bt
#0  0x00007f9666184771 in pthread_kill () from /lib64/libpthread.so.0
#1  0x0000000000aa3b62 in my_write_core (sig=11) at /export/umesh/server/source/bugs/src_build/89438/mysql-5.6.39/mysys/stacktrace.c:424
#2  0x000000000072c930 in handle_fatal_signal (sig=11) at /export/umesh/server/source/bugs/src_build/89438/mysql-5.6.39/sql/signal_handler.cc:230
#3  <signal handler called>
#4  0x000000000062265e in network_init () at /export/umesh/server/source/bugs/src_build/89438/mysql-5.6.39/sql/mysqld.cc:2542
#5  0x000000000062813b in mysqld_main (argc=8, argv=0x26ba6a8) at /export/umesh/server/source/bugs/src_build/89438/mysql-5.6.39/sql/mysqld.cc:5581
#6  0x000000000061d170 in main (argc=8, argv=0x7ffce7ea6b38) at /export/umesh/server/source/bugs/src_build/89438/mysql-5.6.39/sql/main.cc:25
(gdb)