Bug #47657 | MySQL 5.1.39: Crashed on installing system databases | ||
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Submitted: | 26 Sep 2009 6:22 | Modified: | 13 Oct 2016 13:20 |
Reporter: | Dinh Pham | Email Updates: | |
Status: | Can't repeat | Impact on me: | |
Category: | MySQL Server: Installing | Severity: | S1 (Critical) |
Version: | 5.1.39 | OS: | Linux (Linux web2 2.6.18-92.1.18.el5.028stab060.8 #1 SMP Mon Feb 9 21:44:50 MSK 2009 x86_64 x86_64 x86_64 G) |
Assigned to: | CPU Architecture: | Any | |
Tags: | crashed, linux, mysql_install_db, regression |
[26 Sep 2009 6:22]
Dinh Pham
[26 Sep 2009 8:46]
Valeriy Kravchuk
Thank you for the problem report. Please, send the resolved stack trace and the results of: file mysqld free Linux commands. I want to check if your mysqld binary is 32-bit and how much free memory do you have. Send also your my.cnf file content.
[26 Sep 2009 14:45]
Dinh Pham
Here is the link that I used to download source code http://dev.mysql.com/get/Downloads/MySQL-5.1/mysql-5.1.39.zip/from/pick Some more information Free memory ----------- total used free shared buffers cached Mem: 8171444 7992848 178596 0 79416 4069436 -/+ buffers/cache: 3843996 4327448 Swap: 2031608 430560 1601048 CPU ----------- 4 cores processor : 3 GCC ----------- Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --enable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-44) vendor_id : AuthenticAMD cpu family : 15 model : 33 model name : Dual Core AMD Opteron(tm) Processor 290 stepping : 2 cpu MHz : 2791.094 cache size : 1024 KB physical id : 1 siblings : 2 core id : 1 cpu cores : 2 fpu : yes fpu_exception : yes cpuid level : 1 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt lm 3dnowext 3dnow pni lahf_lm cmp_legacy bogomips : 5581.20 TLB size : 1024 4K pages clflush size : 64 cache_alignment : 64 address sizes : 40 bits physical, 48 bits virtual power management: ts fid vid ttp file mysqld -------------------- mysqld: ELF 64-bit LSB executable, AMD x86-64, version 1 (SYSV), for GNU/Linux 2.6.9, statically linked, for GNU/Linux 2.6.9, not stripped ulimit -a -------------------- core file size (blocks, -c) 0 data seg size (kbytes, -d) unlimited max nice (-e) 0 file size (blocks, -f) unlimited pending signals (-i) 66048 max locked memory (kbytes, -l) 32 max memory size (kbytes, -m) unlimited open files (-n) 1024 pipe size (512 bytes, -p) 8 POSIX message queues (bytes, -q) 819200 max rt priority (-r) 0 stack size (kbytes, -s) 10240 cpu time (seconds, -t) unlimited max user processes (-u) 66048 virtual memory (kbytes, -v) unlimited file locks (-x) unlimited
[26 Sep 2009 14:48]
Dinh Pham
my.cnf -------------------------- [client] port = 3306 socket = /tmp/mysql.sock [mysqld] port = 3306 socket = /tmp/mysql.sock skip-locking skip-name-resolve default-storage-engine=MyISAM default-character-set=utf8 character-set-server=utf8 collation_server=utf8_general_ci key_buffer_size = 384M key_buffer = 384M max_allowed_packet = 8M table_open_cache = 512 sort_buffer_size = 2M read_buffer_size = 2M read_rnd_buffer_size = 8M join_buffer_size = 5M bulk_insert_buffer_size = 32M thread_concurrency = 8 thread_stack = 192K thread_cache_size=8 query_cache_limit=2M query_cache_size=64M query_cache_type=1 connect_timeout=10 max_connections = 400 max_connect_errors = 10000 wait_timeout=600 concurrent_insert=2 max_heap_table_size = 50M net_buffer_length = 512K tmp_table_size = 64M tmpdir = /dev/shm myisam_sort_buffer_size = 64M myisam_recover = force,backup ft_min_word_len=1 ft_max_word_len=30 log-error=/usr/local/mysql/data/db1.err slow_query_log=1 slow_query_log_file=/usr/local/mysql/data/Clip-slow.log long_query_time=1 expire_logs_days=1 log-bin=mysql-bin server-id = 1 [mysqldump] quick max_allowed_packet = 16M [mysql] no-auto-rehash [myisamchk] key_buffer_size = 256M sort_buffer_size = 256M read_buffer = 2M write_buffer = 2M # Full text search ft_min_word_len=1 ft_max_word_len=30 [mysqlhotcopy] interactive-timeout [mysqld_safe] open_files_limit = 16344
[26 Sep 2009 14:51]
Dinh Pham
Hi Valeriy, > Please, send the resolved stack trace How could I do that? Do I need to re-compile MySQL with --with-debug to get the trace?
[26 Sep 2009 15:41]
Dinh Pham
Trace 1 -------------------- 0x771c94 ha_myisammrg::extra_opt(ha_extra_function, unsigned long) + 2 0x4be382 check_single_table_access(THD*, unsigned long, TABLE_LIST*, bool) + 62 0x6396f0 Event_scheduler::execute_top(Event_queue_element_for_exec*) + 372 0x790db7 add_collation + 426 0x766e9b merge_index + 154 0x51183e st_table::restore_column_maps_after_mark_index() + 98 0x5123c7 table_check_intact(st_table*, unsigned int, st_table_field_w_type const*) + 35 0x5c0ee0 mysql_upgrade_db(THD*, st_mysql_lex_string*) + 816 0x4d3999 __static_initialization_and_destruction_0(int, int) + 17661 0x4d4748 __static_initialization_and_destruction_0(int, int) + 21164 0x4d61ce __static_initialization_and_destruction_0(int, int) + 27954 0x6361d7 Table_triggers_list::create_trigger(THD*, TABLE_LIST*, String*) + 445 0x8053c9 __parse_one_specmb + 857 Trace 2 ----------------------- 0x771c94 ha_myisammrg::extra_opt(ha_extra_function, unsigned long) + 2 0x4be382 check_single_table_access(THD*, unsigned long, TABLE_LIST*, bool) + 62 0x6396f0 Event_scheduler::execute_top(Event_queue_element_for_exec*) + 372 0x5bb95b ha_release_savepoint(THD*, st_savepoint*) + 23 0x5bbb05 ha_savepoint(THD*, st_savepoint*) + 185 0x61ec9c mysqld_help(THD*, char const*) + 512 0x50fa6c TABLE_LIST::setup_underlying(THD*) + 532 0x511813 st_table::restore_column_maps_after_mark_index() + 55 0x5123c7 table_check_intact(st_table*, unsigned int, st_table_field_w_type const*) + 35 0x5126f6 table_check_intact(st_table*, unsigned int, st_table_field_w_type const*) + 850 0x62c793 sp_head::execute_function(THD*, Item**, unsigned int, Field*) + 987 0x4beeac log_slow_statement(THD*) + 182 0x4c318b mysql_execute_command(THD*) + 2325 0x7d4e00 sin + 848 0x4001b9 _start + 41 Trace 3 (MySQL built with --with-debug ------------------------------- Error log --------- thd: 0x1ba22d10 Attempting backtrace. You can use the following information to find out where mysqld died. If you see no messages after this, something went terribly wrong... stack_bottom = 0x40b17f50 thread_stack 0x30000 [0x794ef9] [0x4b3980] [0x657e00] [0x50371f] [0x49eae7] [0x4c9c26] [0x654d97] [0x824789] Trying to get some variables. Some pointers may be invalid and cause the dump to abort... thd->query at 0x1ba2dde0 = INSERT INTO tmp_db VALUES ('%','test','','Y','Y','Y','Y','Y','Y','N','Y','Y','Y','Y','Y','Y','Y','Y','N','N','Y','Y') thd->thread_id=1 thd->killed=KILL_CONNECTION The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains information that should help you find out what is causing the crash. Trace ----- 0x794ef9 my_print_stacktrace + 41 0x4b3980 handle_segfault + 574 0x657e00 __restore_rt + 0 0x50371f close_temporary_tables(THD*) + 517 0x49eae7 THD::cleanup() + 199 0x4c9c26 handle_bootstrap + 970 0x654d97 start_thread + 199 0x824789 clone + 121
[26 Sep 2009 15:57]
Dinh Pham
I just made a clean re-compilation and installation (without debug mode). Here is the latest trace on the crash 0x771c94 my_write_core + 20 0x4be382 handle_segfault + 818 0x6396f0 __restore_rt + 0 0x5bb95b tablename_to_filename(char const*, char*, unsigned int) + 27 0x5bbb05 build_table_filename(char*, unsigned long, char const*, char const*, char const*, unsigned int) + 261 0x61ec9c Table_triggers_list::check_n_load(THD*, char const*, char const*, st_table*, bool) + 76 0x50fa6c open_unireg_entry(THD*, st_table*, TABLE_LIST*, char const*, char*, unsigned int, st_mem_root*, unsigned int) + 1196 0x511813 open_table(THD*, TABLE_LIST*, st_mem_root*, bool*, unsigned int) + 2067 0x5123c7 open_tables(THD*, TABLE_LIST**, unsigned int*, unsigned int) + 1639 0x5126f6 open_and_lock_tables_derived(THD*, TABLE_LIST*, bool) + 70 0x62c793 plugin_init(int*, char**, int) + 1715 0x4beeac init_server_components() + 524 0x4c318b main + 1771 0x7d4e00 ____strtoll_l_internal + 528 0x4001b9 _start + 41
[26 Sep 2009 20:26]
Sveta Smirnova
Thank you for the feedback. Verified as described using mysql-5.1-bugteam tree: compile with options provided, run mysql_install_db, get crash.
[1 Oct 2009 6:02]
Sveta Smirnova
Bug is not repeatable with version 5.0
[1 Oct 2009 10:27]
Sveta Smirnova
Seems like all options are needed as I can not repeat this if remove one. Also problem is not repeatable in my environment if LD_LIBRARY_PATH contains directory with 5.0 libraries.
[7 Oct 2009 7:00]
Dinh Pham
Hi, Is there any update on this issue? Dinh
[7 Oct 2009 7:03]
Dinh Pham
I had the same problem with MySQL 5.1.37
[13 Oct 2016 13:20]
Daniel Fischer
No longer reproducible with current versions of MySQL.